Instructions for how to use Microbiome Platform Tools
The Microbiome Platform makes its programs and associated databases publicly available to all OSC <Heather insert link to OSC here?> users as applications and modules.
Once you've logged into OSC, activate the CoMS microbiome tools module system:
| module use /fs/ess/community/CoMS_microbiome_tools/sif-apps_staging/modulefiles
Once activated, you can view the CoMS microbiome tools, as well as others available system-wide on OSC:
| module avail
To use a CoMS microbiome tool, load the module similar to any OSC module:
| module load [tool]/[version]
This will display instructions for its use, as well as alternatives.
Additional information are available in the README file:
| cat /fs/ess/community/CoMS_microbiome_tools/README_usage
If a module or application does not work, or you do not see the one(s) that you want, please contact microbiome@osu.edu.