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Publications

These selected publications are growing everyday.

  • Microcystis Toxin-Mediated Tumor Promotion and Toxicity Lead to Shifts in Mouse Gut Microbiome. Link
     
  • Distinctive gut microbiota of honey bees assessed using deep sampling from individual worker bees. Link
     
  • Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont. Link
     
  • Gut microbiota in wild and captive Guizhou snub‐nosed monkeys, Rhinopithecus brelichi. Link
  • A Pathovar of Xanthomonas oryzae Infecting Wild Grasses Provides Insight Into the Evolution of Pathogenicity in Rice Agroecosystems. Link
  • Water security and gut microbiome in rural Nicaraguan children. Link
     
  • Amish (Rural) vs. non-Amish (Urban) Infant Fecal Microbiotas Are Highly Diverse and Their Transplantation Lead to Differences in Mucosal Immune Maturation in a Humanized Germfree Piglet Model. Link
     
  • Indoor microbial communities: Influence on asthma severity in atopic and nonatopic children. Link
     
  • Clostridioides difficile uses amino acids associated with gut microbial dysbiosis in a subset of patients with diarrhea. Link
  • Tile drainage and land use contribute to harmful algal bloom and microbiota shift in inland water. Link
     
  • Urban stormwater microbiome and antibiotic resistance profile. Link
     
  • Microbiome and resistome of drinking water treatment residuals that are used for agricultural application. Link
     
  • Microbiome and antibiotic resistance in integrated fish farm water. Link
     
  • Community Genomics Among Stratified Microbial Assemblages in the Ocean’s Interior. Link
     
  • Quantitative evaluation of bioaerosols in different particle size fractions in dust collected on the International Space Station (ISS). Link
     
  • Genome-centric view of carbon processing in thawing permafrost. Link
     
  • Methane dynamics regulated by microbial community response to permafrost thaw. Link
     
  • Host-linked soil viral ecology along a permafrost thaw gradient. Link
     
  • Expanding Tara Oceans protocols for underway, ecosystemic sampling of the ocean-atmosphere interface during Tara Pacific expedition. Link
     
  • The Tara Pacific expedition—A pan-ecosystemic approach of the “-omics” complexity of coral reef holobionts across the Pacific Ocean. Link
     
  • Oil Biodegradation and Oil-Degrading Microbial Populations in Marsh Sediments Impacted by Oil from the Deepwater Horizon Well Blowout. Link
     
  • Global forensic geolocation with deep neural networks. Link
     
  • Genome-centric view of carbon processing in thawing permafrost. Link
     
  • Morphology and quantification of fungal growth in residential dust and carpets. Link
  • Fighting Fire with Fire: Phage Potential for the Treatment of E. coli O157 Infection. Link
  • The ISOGENIE project
     
  • iVirus: facilitating new insights in viral ecology with software and community data sets imbedded in a cyberinfrastructure. Link