Informatics Tools

• Microbiome Platform presented by IDI-GEMS and CoMS

• Microbial and Viral Ecological Research in Columbus Informatics (MAVERICs)
   
• CoMS Microbiome Working Group Webinars / Primers (coming soon!)
   
• CoMS Advanced Ecological Statistics Working Group Webinars / Primers (coming soon!)
   
• CoMS Viromics Working Group Webinars / Primers

• Free Intro to R
• R Basics
• R for Data Science
• Learn Python
• Other Data Science Tutorials (Machine Learning, Data Visualization)
• Unix tutorial (basic commands in the terminal)

For plotting data

• Matplotlib
• Plotly
• R-Graph Gallery

For 16S and Metagenomics

• Huttenhower lab tools (PICRUSt, GraPhlAn, MetaPhlAn, MetaPhlAn2, LEfSe, microPITA)
• MicrobiomAnalyst
• DADA2 tutorial
• Harnessing Our Inner Ecology to Track and Treat Disease: Free Virtual Course
  • Offered by the Institute for Systems Biology, this course is available via YouTube and covers topics including:
    • Analyzing amplicon sequencing data with QIIME2
    • Modeling microbiota-wide metabolism with MICOM
    • Defining a healthy gut microbiome: Insights from deeply phenotyped cohorts

For Metabolomics

• MetaboAnalyst

For Multi-omics integration

• OmicsNet

For linking miRNA’s to targets and functions

• miRNet

For RNASeq gene-expression profiling

• NetworkAnalyst